docs: fieldtest F3/F6 doc-gap fixes — manifest provenance in glossary, Aura.toml scaffold reality

Two doc-tightenings from the green milestone fieldtest (F3, F6 in
fieldtests/milestone-project-environment/FINDINGS.md): the glossary
manifest entry now names the topology hash and the project provenance
block {namespace, dylib_sha256, commit} a project-hosted run carries;
project-layout.md's Aura.toml annotation now matches what the scaffold
actually emits today ([paths] runs only — the data archive root joins
once real data enters).

refs #180

docs/glossary.md

@@ -137,7 +137,7 @@ A concrete, frozen graph produced by binding a blueprint to params + data + seed
 
 ### manifest
 **Avoid:** —
-The reproducible metadata record of a run (node-commit + params + data-window + seed + broker profile), paired with metrics in the run registry — the run-output record, *not* the Cargo.toml/`Aura.toml`-style static *config* manifest. Determinism lets the full result be re-derived from this tiny record on demand.
+The reproducible metadata record of a run (node-commit + params + data-window + seed + broker profile + `topology hash`, plus — for a project-hosted run — the `project` provenance block `{namespace, dylib_sha256, commit}`), paired with metrics in the run registry — the run-output record, *not* the Cargo.toml/`Aura.toml`-style static *config* manifest. Determinism lets the full result be re-derived from this tiny record on demand.
 
 ### Monte-Carlo
 **Avoid:** MC

docs/project-layout.md

@@ -30,9 +30,11 @@ A project is always a Rust program built on the engine.
 
 ```
 ger40-lab/                 # your research project — a separate Rust crate (cdylib)
-├── Aura.toml              # STATIC context only, paths only: data archive root,
-│                          # runs dir (no logic; instrument geometry is the
-│                          # recorded sidecar, C15 — never authored here)
+├── Aura.toml              # STATIC context only, paths only: the runs dir (all
+│                          # the scaffold emits today), plus a data archive root
+│                          # once real data enters; no logic — instrument
+│                          # geometry is the recorded sidecar (C15), never
+│                          # authored here
 ├── Cargo.toml             # cdylib; depends on aura-core/aura-std (+ shared node crates);
 │                          # carries an empty [workspace] table (see note below)
 ├── CLAUDE.md              # the project's own skills wiring (authoring discipline)